circRNA basic information
circBase ID: hsa_circ_0036412
Name: hsa_circ_ETFA
Synonym: CircETFA
Host Gene: ETFA
Genomic location(hg19): chr15:76584959-76588078:-
Genomic location(hg38): chr15:76292618-76295737:-
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma; tumor tissue; adjacent normal tissues

Cell lines:

HL7702; YY8103; Hep3B; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CCL5, EIF4A3, PI3K/Akt pathway, FoxO6
Associated microRNA: hsa-miR-612
Biological function: Promotes proliferation, invasion and metastasis; inhibits apoptosis; inhibits cycle arrest in hepatocellular carcinoma.
Molecular mechanism: Acts as a sponge of hsa-miR-612 to relieve repression of CCL5; recruits EIF4A3 to prolong the half-life of CCL5 mRNA, leading to activation of PI3K/Akt signaling and downstream effectors such as FoxO6.
Biological pathway or process:

PI3K/AKT (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); apoptosis (inhibits); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Sanger Sequencing; Back-Splice Junction PCR / divergent primers PCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RNA Pull-Down; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Western Blot; Survival Analysis; ROC Analysis; Bioinformatics Analysis; RNA-seq

Clinical significance:

Abnormally high circETFA expression was associated with a poor prognosis; circETFA distinguishes HCC plasma from normal plasma with an AUC of 0.8.

Description:

CircETFA is up-regulated in HCC tissues/plasma/cells and promotes HCC proliferation, invasion and metastasis while inhibiting apoptosis. Mechanistically, it upregulates CCL5 by sponging hsa-miR-612 and by recruiting EIF4A3 to prolong CCL5 mRNA half-life, thereby enhancing PI3K/Akt signaling (including FoxO6). High circETFA is associated with poor overall survival and shows diagnostic potential in plasma.

Confidence score:

0.895

Other information
Title:

CircETFA upregulates CCL5 by sponging miR-612 and recruiting EIF4A3 to promote hepatocellular carcinoma.

Journal: Cell death discovery
Published: 2021
PubMed ID: 34716323
Study type:

combined biological and clinical study

Data availability: GSE166678
Code availability: -