circRNA basic information
circBase ID: hsa_circ_0005273
Name: hsa_circ_PTK2
Synonym: -
Host Gene: PTK2
Genomic location(hg19): chr8:141710989-141716304:-
Genomic location(hg38): chr8:140700890-140706205:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; adjacent normal tissues

Cell lines:

MDA-MB-231; MCF-7; HCC-1937; SKBR3; MCF-10A; 293 T; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: YAP1, AGO2, LATS1/2, MST1
Associated microRNA: miR-200a-3p
Biological function: promotes proliferation and migration; promotes cell cycle progression; promotes tumor growth in vivo
Molecular mechanism: acts as a ceRNA/miRNA sponge for miR-200a-3p to upregulate YAP1 and inactivate Hippo signaling
Biological pathway or process:

Hippo/YAP (inhibits); proliferation (promotes); migration (promotes); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; MTT; Colony Formation Assay; Transwell Assay; Wound Healing Assay; Cell Cycle Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Bioinformatics Analysis; Clinical Sample Validation; RNA-seq

Clinical significance:

High expression hsa_circ_0005273 was positively associated with TNM stage, lymph node metastasis, tumor size and distant metastasis; potential biomarker and therapeutic target

Description:

hsa_circ_0005273 is up-regulated in breast cancer tissues and cell lines and promotes tumorigenesis (proliferation, migration, cell-cycle progression, and xenograft growth). Mechanistically, it acts as a cytoplasmic miR-200a-3p sponge to increase YAP1 and thereby inactivate Hippo signaling.

Confidence score:

0.8771

Other information
Title:

Hsa_circ_0005273 facilitates breast cancer tumorigenesis by regulating YAP1-hippo signaling pathway.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2021
PubMed ID: 33436041
Study type:

combined biological and clinical study

Data availability: GSE113230
Code availability: -