circRNA basic information
circBase ID: hsa_circ_0011385
Name: hsa_circ_EIF3I
Synonym: circRNA 100146
Host Gene: EIF3I
Genomic location(hg19): chr1:32691771-32692131:+
Genomic location(hg38): chr1:32226170-32226530:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent normal tissues

Cell lines:

SW620; SW480; HCT116; LOVO; NCM460

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HMGA2, Ago2
Associated microRNA: miR-149
Biological function: Promotes CRC cell proliferation and tumor growth; inhibits apoptosis; promotes migration and invasion; promotes in vivo tumor growth and lung metastasis.
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-149, thereby relieving miR-149-mediated repression of HMGA2.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); metastasis (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Transfection; MTT; Annexin V/PI Flow Cytometry; Transwell Assay; Western Blot; In Vivo Animal Model; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

May serve as an early diagnostic biomarker for detection of CRC; higher expression associated with metastasis and advanced stages.

Description:

circRNA 100146 (hsa_circ_0011385, from EIF3I) is upregulated in colorectal cancer tissues and cell lines. It promotes CRC proliferation, migration/invasion and tumor growth/metastasis and inhibits apoptosis by sponging miR-149 to upregulate HMGA2 (circRNA 100146/miR-149/HMGA2 axis).

Confidence score:

0.8275

Other information
Title:

Circular RNA 100146 Promotes Colorectal Cancer Progression by the MicroRNA 149/HMGA2 Axis.

Journal: Molecular and cellular biology
Published: 2021
PubMed ID: 33257506
Study type:

combined biological and clinical study

Data availability: GSE126094; GPL19978
Code availability: -