circRNA basic information
circBase ID: hsa_circ_0002570
Name: hsa_circ_FAM73A
Synonym: CircFAM73A
Host Gene: FAM73A
Genomic location(hg19): chr1:78267015-78280916:+
Genomic location(hg38): chr1:77801330-77815231:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent noncancer tissues

Cell lines:

BGC823; SGC7901; AGS; HGC27; MKN45; MGC803; SGC7901; GES-1; BGC823CDDP; SGC7901CDDP

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HMGA2, HNRNPK, beta-catenin, HNRNPL, E2F1, pRB
Associated microRNA: miR-490-3p
Biological function: promotes CSC-like properties, proliferation, migration, cisplatin resistance, tumor growth and metastasis; stabilizes beta-catenin
Molecular mechanism: acts as a miRNA sponge for miR-490-3p to upregulate HMGA2 in a positive feedback loop; recruits/binds HNRNPK to enhance HNRNPK-beta-catenin interaction and reduce beta-catenin degradation; HMGA2 enhances circFAM73A expression via E2F1-mediated transcription and HNRNPL-mediated circularization
Biological pathway or process:

stemness (promotes); proliferation (promotes); migration (promotes); metastasis (promotes); apoptosis (inhibits); chemoresistance (promotes); Wnt/beta-catenin (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNA-seq; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis; Transfection; CCK8; EdU Staining; Colony Formation Assay; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Luciferase Reporter Assay; RNA Pull-Down; RIP (RNA Immunoprecipitation); Co-IP; ChIP / ChIP-seq; In Vivo Animal Model; H&E Staining; Western Blot; IHC (Immunohistochemistry)

Clinical significance:

High circFAM73A expression predicts poor prognosis and is an independent prognostic factor in GC patients

Description:

CircFAM73A is up-regulated in gastric cancer and promotes CSC-like traits, proliferation, migration, metastasis, and cisplatin resistance. It sponges miR-490-3p to upregulate HMGA2 in a positive feedback loop, and also binds HNRNPK to stabilize beta-catenin, enhancing Wnt/beta-catenin signaling and malignancy.

Confidence score:

0.8988

Other information
Title:

CircFAM73A promotes the cancer stem cell-like properties of gastric cancer through the miR-490-3p/HMGA2 positive feedback loop and HNRNPK-mediated beta-catenin stabilization.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2021
PubMed ID: 33731207
Study type:

combined biological and clinical study

Data availability: GSE83521
Code availability: -