circRNA basic information
circBase ID: hsa_circ_0000392
Name: hsa_circ_YAF2
Synonym: circRNA_0000392
Host Gene: YAF2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent normal tissues; tumor tissues; normal adjacent tissue samples

Cell lines:

SW620; RKO; 293 T; HT29; HCT116; SW480; SW837; SW48; SW620; NCM460

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PIK3R3, AKT, mTOR, AGO2
Associated microRNA: miR-193a-5p
Biological function: promotes proliferation and invasion; inhibits apoptosis; promotes tumor growth in vivo
Molecular mechanism: Acts as a miRNA sponge (ceRNA) for miR-193a-5p to regulate PIK3R3, promoting AKT/mTOR pathway activation
Biological pathway or process:

proliferation (promotes); invasion (promotes); apoptosis (inhibits); PI3K/AKT/mTOR (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; FISH / smFISH; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; MTT; Annexin V/PI Flow Cytometry; Transwell Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining; ROC Analysis; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

circRNA_0000392 could discriminate CRC from adjacent normal tissues (AUC 0.713) and its expression was correlated with pathological stage, lymph node metastasis and distant metastasis

Description:

circRNA_0000392 is up-regulated in colorectal cancer and promotes malignant phenotypes (proliferation, invasion, tumor growth). It mainly localizes to the cytoplasm and acts as a ceRNA by sponging miR-193a-5p, thereby increasing PIK3R3 and activating the AKT/mTOR pathway.

Confidence score:

0.8768

Other information
Title:

CircRNA_0000392 promotes colorectal cancer progression through the miR-193a-5p/PIK3R3/AKT axis.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2020
PubMed ID: 33317596
Study type:

combined biological and clinical study

Data availability: The datasets used during the current study are available from the corresponding authors upon reasonable request.
Code availability: -