circRNA basic information
circBase ID: -
Name: hsa_circ_ADAMTS13
Synonym: circADAMTS13 / hsa_circ:chr9:136302869-136303486
Host Gene: ADAMTS13
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tumor tissues; matched peritumor tissues; adjacent normal tissue

Cell lines:

PLC/PRF/5; SK-Hep-1; Hep3B; HepG2; HEK-293; HEK-293T; SMMC-7721; Bel-7402; Huh7

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: miR-484
Biological function: Suppresses HCC cell proliferation and increases apoptosis.
Molecular mechanism: Acts as a miRNA sponge by directly binding miR-484; miR-484 mimics rescue the tumor-suppressing effect of circADAMTS13.
Biological pathway or process:

proliferation (inhibits); apoptosis (promotes); ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

circRNA-seq; Bioinformatics Analysis; RT-qPCR; divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Clinical Sample Validation; Cohort Study; Survival Analysis

Clinical significance:

Low circADAMTS13 expression is associated with larger tumor size and shorter RFS; circADAMTS13 shows high diagnostic AUC for distinguishing HCC tumor tissues from healthy liver tissues.

Description:

circADAMTS13 is down-regulated in HCC tumor tissues and functions as a tumor suppressor by inhibiting HCC cell proliferation and promoting apoptosis. Mechanistically, it directly binds (sponges) miR-484, and miR-484 mimics can rescue the suppressive phenotype. Clinically, low circADAMTS13 is associated with larger tumor size and shorter RFS.

Confidence score:

0.8405

Other information
Title:

Circular RNA profiling identifies circADAMTS13 as a miR-484 sponge which suppresses cell proliferation in hepatocellular carcinoma.

Journal: Molecular oncology
Published: 2019
PubMed ID: 30537115
Study type:

combined biological and clinical study

Data availability: -
Code availability: -