circRNA basic information
circBase ID: hsa_circ_0003141
Name: hsa_circ_UBAP2
Synonym: -
Host Gene: UBAP2
Genomic location(hg19): chr9:33953282-33973235:-
Genomic location(hg38): chr9:33953284-33973237:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; normal tissues; tumor tissues

Cell lines:

Huh-7; Hep3B2.1-7

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: UBAP2
Associated microRNA: miR-1827
Biological function: promotes HCC tumorigenesis by promoting proliferation and invasion and inhibiting apoptosis; promotes EMT process
Molecular mechanism: ceRNA sponging miR-1827 to increase UBAP2 expression
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); invasion (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Clinical Sample Validation; Transfection; CCK8; Annexin V/PI Flow Cytometry; Transwell Assay; Western Blot; FISH / smFISH; Luciferase Reporter Assay; In Vivo Animal Model

Clinical significance:

increased hsa_circ_0003141 levels could predict worse survival outcomes in HCC patients

Description:

hsa_circ_0003141 is up-regulated in hepatocellular carcinoma and acts as an oncogenic circRNA. It promotes proliferation, invasion and EMT and inhibits apoptosis by functioning as a ceRNA that sponges miR-1827 to increase UBAP2 expression, and its knockdown suppresses tumor growth in a Huh-7 xenograft model.

Confidence score:

0.697

Other information
Title:

Circular RNA hsa_circ_0003141 promotes tumorigenesis of hepatocellular carcinoma via a miR-1827/UBAP2 axis.

Journal: Aging
Published: 2020
PubMed ID: 32464601
Study type:

combined biological and clinical study

Data availability: GSE97332; GSE94508; TCGA
Code availability: -