circRNA basic information
circBase ID: -
Name: hsa_circ_SETD3
Synonym: circSETD3
Host Gene: SETD3
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral venous blood; HCC tissues; tumor samples

Cell lines:

Huh7

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: MAPK14
Associated microRNA: miR-421
Biological function: Tumor suppressor; low venous expression predicts microvascular invasion; knockdown promotes migration and invasion of HCC cells
Molecular mechanism: Acts as a miRNA sponge (ceRNA) for miR-421, involving the circSETD3/miR-421/MAPK14 pathway
Biological pathway or process:

migration (inhibits); invasion (inhibits); metastasis (inhibits); ceRNA regulation (other); MAPK (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Transfection; Wound Healing Assay; Transwell Assay; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Low venous circSETD3 expression is an independent risk factor of microvascular invasion (MVI) and has predictive ability for MVI in HCC patients before surgery

Description:

This study reports that circSETD3 is down-regulated in peripheral venous blood of HCC patients versus healthy controls and that low venous circSETD3 is associated with invasive clinicopathological features including MVI. Functional assays in Huh7 cells indicate that circSETD3 suppresses migration and invasion, consistent with a tumor-suppressive role, and the study links circSETD3 to a miR-421-related regulatory axis with predictive value for MVI.

Confidence score:

0.6304

Other information
Title:

Correlation between the expressions of circular RNAs in peripheral venous blood and clinicopathological features in hepatocellular carcinoma.

Journal: Annals of translational medicine
Published: 2020
PubMed ID: 32355782
Study type:

combined biological and clinical study

Data availability: -
Code availability: -