circRNA basic information
circBase ID: hsa_circ_0001874
Name: hsa_circ_BICD2
Synonym: -
Host Gene: BICD2
Genomic location(hg19): chr9:95500310-95500614:-
Genomic location(hg38): chr9:92738028-92738332:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; paracarcinoma tissues

Cell lines:

GES-1; BGC-823; SGC-7901

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: downstream target protein genes
Associated microRNA: miR-593-5p, miR-103a-3p, miR-107
Biological function: Plays significant roles in gastric carcinogenesis and progression; associated with invasion and lymphatic metastasis.
Molecular mechanism: Predicted miRNA sponge/ceRNA mechanism via miR-593-5p, miR-103a-3p, and miR-107 to regulate downstream target genes.
Biological pathway or process:

cell cycle (other); p53 signaling (other); metabolic processes (other); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Sanger Sequencing; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Expression decreased in 78.02% (71/91) GC patients; ROC AUC 0.673 (sensitivity 61.54%, specificity 68.13%); associated with differentiation, tumor stage, invasion, lymphatic metastasis and CEA level.

Description:

hsa_circ_0001874 is down-regulated in gastric cancer tissues and GC cell lines and is proposed as a diagnostic indicator (AUC 0.673). Bioinformatics predicts it acts as a miRNA sponge for miR-593-5p, miR-103a-3p and miR-107, potentially influencing cell cycle-, p53 signaling- and metabolism-related processes via downstream target genes.

Confidence score:

0.5963

Other information
Title:

Circular RNA hsa_circ_0001874 is an indicator for gastric cancer.

Journal: Journal of clinical laboratory analysis
Published: 2021
PubMed ID: 34028890
Study type:

combined biological and clinical study

Data availability: The data that support the findings of this study are available from the corresponding author upon reasonable request.
Code availability: -