circRNA basic information
circBase ID: hsa_circ_0001633
Name: hsa_circ_SOBP
Synonym: circSOBP
Host Gene: SOBP
Genomic location(hg19): chr6:107824860-107827631:+
Genomic location(hg38): chr6:107503656-107506427:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008315
MONDO name: prostate cancer
Disease details: prostate cancer
Disease DO ID:
10283
Disease MeSH ID:
D011471
Disease NCIt ID:
C7378
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PCa tissues; adjacent noncancerous prostate (ANP) tissues

Cell lines:

DU145; PC-3; LNCap; 22Rv1; RWPE-1; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: MYPT1, p-MLC2, URH49
Associated microRNA: miR-141-3p
Biological function: suppresses migration, invasion, amoeboid migration, and metastasis
Molecular mechanism: circSOBP sponges miR-141-3p to regulate MYPT1 and p-MLC2 (MYPT1/p-MLC2 axis), thereby controlling amoeboid migration
Biological pathway or process:

migration (inhibits); invasion (inhibits); metastasis (inhibits); other pathway/process (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; ROC Analysis; Luciferase Reporter Assay; Transfection; Transwell Assay; Western Blot; IF (Immunofluorescence); In Vivo Animal Model; H&E Staining; Bioinformatics Analysis

Clinical significance:

circSOBP level was correlated with the grade group of PCa; ROC AUC=0.763 for distinguishing PCa and ANP tissues

Description:

circSOBP (hsa_circ_0001633), derived from SOBP, is down-regulated in prostate cancer and suppresses migration, invasion, and in vivo metastasis. It mainly localizes to the cytoplasm and acts as a miR-141-3p sponge to upregulate MYPT1, thereby modulating the MYPT1/p-MLC2 axis to inhibit amoeboid migration.

Confidence score:

0.8426

Other information
Title:

Novel circular RNA circSOBP governs amoeboid migration through the regulation of the miR-141-3p/MYPT1/p-MLC2 axis in prostate cancer.

Journal: Clinical and translational medicine
Published: 2021
PubMed ID: 33784000
Study type:

combined biological and clinical study

Data availability: The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
Code availability: -