circRNA basic information
circBase ID: hsa_circ_0060745
Name: hsa_circ_CSE1L
Synonym: -
Host Gene: CSE1L
Genomic location(hg19): chr20:47688822-47689234:+
Genomic location(hg38): chr20:49072285-49072697:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissue specimens; paratumor tissue specimens; FFPE CRC specimens

Cell lines:

NCM460; HT29; LOVO; PKO; SW480; RKO

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: CSE1L
Associated microRNA: miR-4736
Biological function: promotes CRC cell proliferation and metastasis
Molecular mechanism: acts as a ceRNA/miRNA sponge to sequester miR-4736, thereby modulating downstream CSE1L signaling
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Transwell Assay; Clinical Sample Validation; Survival Analysis; ROC Analysis; Bioinformatics Analysis

Clinical significance:

High circ_0060745 levels significantly correlated with shorter survival time and an ROC AUC value of 0.8442 indicated that circ_0060745 may be a biomarker of CRC.

Description:

circ_0060745 is up-regulated in colorectal cancer and mainly localizes to the cytoplasm. It promotes CRC cell proliferation, migration/invasion and metastasis by sponging miR-4736, thereby relieving repression of the downstream target CSE1L (circ_0060745/miR-4736/CSE1L axis). High circ_0060745 expression is associated with shorter survival time and shows diagnostic potential by ROC analysis.

Confidence score:

0.859

Other information
Title:

Circular RNA 0060745, a Novel circRNA, Promotes Colorectal Cancer Cell Proliferation and Metastasis Through miR-4736 Sponging.

Journal: OncoTargets and therapy
Published: 2020
PubMed ID: 32273712
Study type:

combined biological and clinical study

Data availability: GSE122182; GSE110224; GSE37364
Code availability: -