circRNA basic information
circBase ID: hsa_circ_0003945
Name: hsa_circ_UBAP2
Synonym: -
Host Gene: UBAP2
Genomic location(hg19): chr9:33953282-33956144:-
Genomic location(hg38): chr9:33953284-33956146:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma
Disease DO ID:
 3347
Disease MeSH ID:
 D012516
Disease NCIt ID:
 C9145
Disease ICD11 ID:
 -
Disease OMIM ID:
 -
Species: Human
Species details: Homo sapiens
Tissue specimen:

-
Cell lines:

hFOB1.19; U2OS; MTX300; HOS; MG63; 143B; ZOS; ZOSM
In vivo animal model:

-
circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: unknown
Molecular mechanism: ceRNA network prediction (circRNA-miRNA-mRNA) in osteosarcoma
Biological pathway or process:

ceRNA regulation (other)
Detected method:
M
Validation methods:

Microarray; Bioinformatics Analysis
Clinical significance:

-
Description:

hsa_circ_0003945 (UBAP2-derived) is down-regulated in osteosarcoma based on GEO circRNA microarray data and was included in the predicted ceRNA network constructed in this study.
Confidence score:

0.1768
Other information
Title:

Construction of a circRNA-miRNA-mRNA network based on competitive endogenous RNA reveals the function of circRNAs in osteosarcoma.

Journal: Cancer cell international
Published: 2020
PubMed ID: 32063749
Study type:

bioinformatics study
Data availability: GSE96964; GSE65071; GSE33382; TARGET
Code availability: -