circRNA basic information
circBase ID: hsa_circ_0001451
Name: hsa_circ_FBXW7
Synonym: novel_circ_022705
Host Gene: FBXW7
Genomic location(hg19): chr4:153332454-153333681:-
Genomic location(hg38): chr4:152411302-152412529:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0018177
MONDO name: glioblastoma
Disease details: glioblastoma
Disease DO ID:
3068
Disease MeSH ID:
D005909
Disease NCIt ID:
C3058
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

glioblastoma tissues; adjacent normal brain tissues / tumor-adjacent tissues; normal brain tissues

Cell lines:

293T; U251; U373; Hs683; SW1783; NHA

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: USP28, c-Myc, FBXW7alpha
Associated microRNA: -
Biological function: represses glioma tumorigenesis by inhibiting proliferation and inducing G1 phase arrest (via its encoded protein FBXW7-185aa)
Molecular mechanism: circ-FBXW7 encodes FBXW7-185aa; FBXW7-185aa binds USP28, antagonizes USP28-induced c-Myc stabilization, and facilitates FBXW7alpha-mediated c-Myc degradation
Biological pathway or process:

proliferation (inhibits); cell cycle (inhibits); ubiquitination (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Northern Blot; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; MTT; EdU Staining; Cell Cycle Assay; In Vivo Animal Model; H&E Staining; Survival Analysis; Luciferase Reporter Assay; Co-IP; RNA Pull-Down; Western Blot

Clinical significance:

circ-FBXW7 is decreased in glioblastoma tissues and higher circ-FBXW7 is associated with longer overall survival

Description:

circ-FBXW7 (hsa_circ_0001451) is down-regulated in glioblastoma/glioma tissues. It encodes the protein FBXW7-185aa, which suppresses glioma cell proliferation and cell-cycle progression by binding USP28, antagonizing USP28-mediated c-Myc stabilization, and facilitating FBXW7alpha-dependent c-Myc degradation; higher circ-FBXW7 is associated with better overall survival.

Confidence score:

0.8689

Other information
Title:

Novel Role of FBXW7 Circular RNA in Repressing Glioma Tumorigenesis.

Journal: Journal of the National Cancer Institute
Published: 2018
PubMed ID: 28903484
Study type:

combined biological and clinical study

Data availability: -
Code availability: -