circRNA basic information
circBase ID: hsa_circ_0021087
Name: hsa_circ_LMO1
Synonym: -
Host Gene: LMO1
Genomic location(hg19): chr11:8248521-8252051:-
Genomic location(hg38): chr11:8226974-8230504:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: Gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; paracancerous tissues; plasma; peripheral blood

Cell lines:

GES1; MGC-803; BGC-823

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: SND1, MMP-2/9, CD44, p53, p21, caspase-3/8, HER3
Associated microRNA: hsa-miR-184, hsa-miR-1276, hsa-miR-450b-3p
Biological function: promotes proliferation; inhibits migration
Molecular mechanism: Predicted ceRNA network in which hsa_circ_0021087 may act as an miRNA sponge for hsa-miR-184, hsa-miR-1276 and hsa-miR-450b-3p to regulate downstream mRNAs.
Biological pathway or process:

proliferation (promotes); migration (inhibits); ceRNA regulation (other); PI3K/AKT (other); cell cycle (other)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Clinical Sample Validation; ROC Analysis; Transfection; CCK8; Wound Healing Assay; Transwell Assay

Clinical significance:

Plasma hsa_circ_0021087 is down-regulated in GC patients and differs between preoperative and postoperative stages; ROC AUC 0.7056 for distinguishing GC from controls; combined with hsa_circ_0005051 improves diagnostic accuracy.

Description:

hsa_circ_0021087 is down-regulated in gastric cancer tissues/cells/plasma and shows postoperative rebound in plasma, supporting its use as a non-invasive diagnostic biomarker. Functionally, it promotes GC cell proliferation and its knockdown increases migration, and it is predicted to act via a circRNA-miRNA-mRNA ceRNA network involving miR-184/miR-1276/miR-450b-3p.

Confidence score:

0.6719

Other information
Title:

A Dual-Circular RNA Signature as a Non-invasive Diagnostic Biomarker for Gastric Cancer.

Journal: Frontiers in oncology
Published: 2020
PubMed ID: 32154178
Study type:

combined biological and clinical study

Data availability: GSE83521; GSE89143; GSE93541; https://cancergenome.nih.gov/
Code availability: -