circRNA basic information
circBase ID: hsa_circ_0054971
Name: hsa_circ_SLC1A4
Synonym: -
Host Gene: SLC1A4
Genomic location(hg19): chr2:65228581-65237897:+
Genomic location(hg38): chr2:65001447-65010763:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
 10534
Disease MeSH ID:
 -
Disease NCIt ID:
 C9331
Disease ICD11 ID:
 1397617262
Disease OMIM ID:
 613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; non-GC tissues
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: -
Molecular mechanism: -
Biological pathway or process:

not specified
Detected method:
Q
M
Validation methods:

Microarray; RNase R Treatment; RT-qPCR; Clinical Sample Validation
Clinical significance:

-
Description:

hsa_circ_0054971 is down-regulated in gastric cancer tissues relative to matched non-cancerous tissues, validated by qRT-PCR consistent with microarray data.
Confidence score:

0.4773
Other information
Title:

Circular RNAs expression profiles in human gastric cancer.

Journal: Scientific reports
Published: 2017
PubMed ID: 28831102
Study type:

combined biological and clinical study
Data availability: GSE100170
Code availability: -