circRNA basic information
circBase ID: hsa_circ_0008039
Name: hsa_circ_PRKAR1B
Synonym: Circ_0008039
Host Gene: PRKAR1B
Genomic location(hg19): chr7:716865-751164:-
Genomic location(hg38): chr7:677228-711527:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; adjacent normal tissues; tumor tissues

Cell lines:

BT20; BT549; MDA-MB-231; MDA-MB-468; MCF10A

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SKA2
Associated microRNA: miR-140-3p
Biological function: promotes breast cancer cell proliferation, migration, invasion, and glycolysis; supports xenograft tumor growth
Molecular mechanism: ceRNA mechanism: circ_0008039 sponges miR-140-3p to positively regulate SKA2, affecting HK2 and glycolysis
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); glycolysis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Nuclear-Cytoplasmic Fractionation; RNase R Treatment; Actinomycin D / DRB Stability Assay; Luciferase Reporter Assay; Transfection; MTT; Colony Formation Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

High expression of circ_0008039 was significantly associated with lymph node metastasis and tumor stage of breast cancer patients.

Description:

circ_0008039 is up-regulated in breast cancer (TNBC) tissues and cells and correlates with advanced stage and lymph node metastasis. Functionally, circ_0008039 promotes proliferation, migration/invasion, and glycolysis. Mechanistically, it acts as a ceRNA by sponging miR-140-3p to increase SKA2 expression, thereby supporting tumor growth in xenografts.

Confidence score:

0.7795

Other information
Title:

Circ_0008039 supports breast cancer cell proliferation, migration, invasion, and glycolysis by regulating the miR-140-3p/SKA2 axis.

Journal: Molecular oncology
Published: 2021
PubMed ID: 33244865
Study type:

combined biological and clinical study

Data availability: -
Code availability: -