circRNA basic information
circBase ID: hsa_circ_0087784
Name: hsa_circ_RNF20
Synonym: circRNF20
Host Gene: RNF20
Genomic location(hg19): chr9:104302484-104303257:+
Genomic location(hg38): chr9:101540202-101540975:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissue specimens; adjacent normal tissue

Cell lines:

MCF-7; MDA-MB-468; MDA-MB-231; MDA-MB-453; MCF-10A; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HIF-1alpha, HK2
Associated microRNA: miR-487a
Biological function: promotes proliferation, inhibits apoptosis, and promotes Warburg effect/glycolysis in breast cancer cells; promotes tumor growth in vivo
Molecular mechanism: ceRNA mechanism: circRNF20 sponges miR-487a to relieve repression of HIF-1alpha; HIF-1alpha binds HK2 promoter to promote HK2 transcription, enhancing glycolysis (Warburg effect)
Biological pathway or process:

glycolysis (promotes); proliferation (promotes); apoptosis (inhibits); ceRNA regulation (promotes); HIF-1 signaling (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; Actinomycin D / DRB Stability Assay; RNase R Treatment; RT-qPCR; FISH / smFISH; Luciferase Reporter Assay; Transfection; CCK8; Annexin V/PI Flow Cytometry; Western Blot; ChIP / ChIP-seq; In Vivo Animal Model; Clinical Sample Validation; Survival Analysis; ROC Analysis

Clinical significance:

Increased circRNF20 level predicted the poor clinical outcome in BC specimens; higher circRNF20 expression indicated the lower survival rate of BC patients

Description:

circRNF20 (hsa_circ_0087784), derived from RNF20, is up-regulated in breast cancer and promotes tumor cell proliferation and glycolytic Warburg effect while inhibiting apoptosis. It functions as a ceRNA by sponging miR-487a to increase HIF-1alpha, which transcriptionally activates HK2, thereby enhancing glycolysis and tumor growth; high circRNF20 predicts poor prognosis.

Confidence score:

0.8806

Other information
Title:

Circular RNA circRNF20 promotes breast cancer tumorigenesis and Warburg effect through miR-487a/HIF-1alpha/HK2.

Journal: Cell death & disease
Published: 2020
PubMed ID: 32094325
Study type:

combined biological and clinical study

Data availability: Supplementary Information accompanies this paper at (10.1038/s41419-020-2336-0).
Code availability: -