circRNA basic information
circBase ID: hsa_circ_0002346
Name: hsa_circ_CRIM1
Synonym: -
Host Gene: CRIM1
Genomic location(hg19): chr2:36623756-36669878:+
Genomic location(hg38): chr2:36396613-36442735:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0015459
MONDO name: nasopharyngeal carcinoma
Disease details: nasopharyngeal carcinoma
Disease DO ID:
9261
Disease MeSH ID:
D00007727; D000077274
Disease NCIt ID:
C3871
Disease ICD11 ID:
1883313543
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

normal nasopharyngeal epithelial tissues; NPC biopsy tissues; FFPE NPC specimens

Cell lines:

S18; S26; HONE1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: FOXQ1, AGO2
Associated microRNA: miR-422a
Biological function: Promotes NPC cell migration, invasion, metastasis, EMT and docetaxel chemoresistance.
Molecular mechanism: Acts as a ceRNA/miRNA sponge: circCRIM1 binds miR-422a to relieve repression of FOXQ1, thereby promoting metastasis, EMT and docetaxel chemoresistance.
Biological pathway or process:

migration (promotes); invasion (promotes); metastasis (promotes); EMT (promotes); ceRNA regulation (promotes); chemoresistance (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RNase R Treatment; divergent primers PCR; Sanger Sequencing; RT-qPCR; Clinical Sample Validation; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; RNA Pull-Down; Transfection; Transwell Assay; CCK8; Colony Formation Assay; Western Blot; IF (Immunofluorescence); In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); ROC Analysis; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circCRIM1 expression is associated with unfavorable survival and is an independent prognostic indicator; a model combining circCRIM1 expression and N stage predicts distant metastasis risk and response to docetaxel-containing induction chemotherapy.

Description:

circCRIM1 (hsa_circ_0002346) is upregulated in nasopharyngeal carcinoma, especially in patients/cells with high metastatic potential. It promotes metastasis/EMT and docetaxel chemoresistance by sponging miR-422a and derepressing FOXQ1, and high expression predicts poor survival and reduced benefit from docetaxel-containing induction chemotherapy.

Confidence score:

0.8942

Other information
Title:

Circular RNA CRIM1 functions as a ceRNA to promote nasopharyngeal carcinoma metastasis and docetaxel chemoresistance through upregulating FOXQ1.

Journal: Molecular cancer
Published: 2020
PubMed ID: 32061262
Study type:

combined biological and clinical study

Data availability: GSE12452; GSE137312; GSE137543; RDDB2020000800
Code availability: -