circRNA basic information
circBase ID: hsa_circ_0001445
Name: hsa_circ_SMARCA5
Synonym: hsa_circ_00001445
Host Gene: SMARCA5
Genomic location(hg19): chr4:144464661-144465125:+
Genomic location(hg38): chr4:143543508-143543972:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: miR-181b
Biological function: prognostic biomarker (higher plasma level associated with longer overall survival); diagnostic biomarker for advanced CRC and stage III vs stage IV differentiation
Molecular mechanism: possible miRNA sponge interaction with miR-181b (trend only; no significant correlation)
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Clinical Sample Validation; ROC Analysis; Survival Analysis; Cohort Study

Clinical significance:

Low plasma levels associated with shorter overall survival; prognostic marker for metastatic CRC; can distinguish stage III from stage IV (ROC)

Description:

hsa_circ_0001445 is up-regulated in plasma from advanced CRC patients and shows diagnostic value. In metastatic CRC, higher plasma hsa_circ_0001445 is associated with longer overall survival, supporting its prognostic biomarker potential. The study explored a possible miRNA-sponge relationship with miR-181b but found only a weak trend without significant correlation.

Confidence score:

0.5918

Other information
Title:

New Circulating Circular RNAs with Diagnostic and Prognostic Potential in Advanced Colorectal Cancer.

Journal: International journal of molecular sciences
Published: 2021
PubMed ID: 34948079
Study type:

clinical study

Data availability: available on request from the corresponding author at e-mail: maria.radanova@mu-varna.bg
Code availability: -