circRNA basic information
circBase ID: hsa_circ_0007255
Name: hsa_circ_KIF4A
Synonym: -
Host Gene: KIF4A
Genomic location(hg19): chrX:69549254-69553539:+
Genomic location(hg38): chrX:70329404-70333689:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

serum; BC tissues; peritumor samples; excised tumors

Cell lines:

T47D; MCF-7; MB231; MB468; MCF-10A

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SIX2
Associated microRNA: miR-335-5p
Biological function: promotes oxygen consumption, colony formation, migration and invasion; promotes xenograft tumor growth
Molecular mechanism: ceRNA/miRNA sponge: circ_0007255 sponges miR-335-5p to regulate SIX2 expression
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); oxidative phosphorylation (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Transfection; Colony Formation Assay; Transwell Assay; Western Blot; In Vivo Animal Model; ROC Analysis; Clinical Sample Validation

Clinical significance:

ROC curves exhibited apparent separation between BC tissues and the healthy donators, with an AUC of 0.7748 for circ_0007255; might serve as a novel diagnostic and prognostic biomarker

Description:

circ_0007255 is up-regulated in breast cancer serum/tissues/cell lines and mainly localizes to the cytoplasm. It promotes malignant behaviors and xenograft tumor growth by sponging miR-335-5p, thereby increasing SIX2 expression, suggesting diagnostic potential (ROC AUC reported).

Confidence score:

0.8025

Other information
Title:

Circular RNA 0007255 regulates the progression of breast cancer through miR-335-5p/SIX2 axis.

Journal: Thoracic cancer
Published: 2020
PubMed ID: 31962380
Study type:

combined biological and clinical study

Data availability: -
Code availability: -