circRNA basic information
circBase ID: hsa_circ_0124644
Name: hsa_circ_ROBO2
Synonym: circ_0124644
Host Gene: ROBO2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004781
MONDO name: acute myocardial infarction
Disease details: acute myocardial infarction
Disease DO ID:
9408
Disease MeSH ID:
-
Disease NCIt ID:
C35204
Disease ICD11 ID:
1334938734
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

serum

Cell lines:

AC16; 293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: SOX4
Associated microRNA: miR-590-3p
Biological function: promotes hypoxia-induced cardiomyocytes injury (reduces viability, induces cell cycle arrest, promotes apoptosis and oxidative stress)
Molecular mechanism: ceRNA mechanism: circ_0124644 sponges miR-590-3p to regulate SOX4
Biological pathway or process:

apoptosis (promotes); oxidative stress (promotes); cell cycle (inhibits); proliferation (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; CCK8; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Western Blot; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Bioinformatics Analysis

Clinical significance:

Circ_0124644 was upregulated in AMI patient serum (potential target for alleviating AMI).

Description:

circ_0124644 is upregulated in AMI patient serum and in hypoxia-treated AC16 cardiomyocytes, where it promotes hypoxia-induced injury. Mechanistically, it acts as a ceRNA that sponges miR-590-3p, thereby increasing SOX4 and aggravating apoptosis/oxidative stress and cell-cycle impairment; circ_0124644 knockdown is protective.

Confidence score:

0.8267

Other information
Title:

Circ_0124644 Serves as a ceRNA for miR-590-3p to Promote Hypoxia-Induced Cardiomyocytes Injury via Regulating SOX4.

Journal: Frontiers in genetics
Published: 2021
PubMed ID: 34249089
Study type:

combined biological and clinical study

Data availability: available from the corresponding author on reasonable request
Code availability: -