circRNA basic information
circBase ID: hsa_circ_0084003
Name: hsa_circ_FGFR1
Synonym: -
Host Gene: FGFR1
Genomic location(hg19): chr8:38271435-38285611:-
Genomic location(hg38): chr8:38413917-38428093:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005184
MONDO name: pancreatic ductal adenocarcinoma
Disease details: Pancreatic ductal adenocarcinoma / PDAC
Disease DO ID:
3498, 3587
Disease MeSH ID:
D021441
Disease NCIt ID:
C9120
Disease ICD11 ID:
581089833
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

PANC1; Capan-1; 293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: DNMT3A, AGO2
Associated microRNA: hsa-miR-143-3p
Biological function: Promotes pancreatic ductal adenocarcinoma cell aerobic glycolysis, epithelial-mesenchymal transition, and cell viability; knockdown inhibits glycolytic capacity and EMT-related protein changes.
Molecular mechanism: hsa_circ_0084003 acts as a ceRNA sponge for hsa-miR-143-3p, thereby regulating DNMT3A expression and promoting aerobic glycolysis and EMT in PDAC cells.
Biological pathway or process:

glycolysis (promotes); EMT (promotes); proliferation (promotes); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; Western Blot; RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Bioinformatics Analysis

Clinical significance:

hsa_circ_0084003 could be studied as a possible therapeutic target and potential biomarker for PDAC targeted therapy.

Description:

This study identifies hsa_circ_0084003 as a pro-oncogenic circRNA in PDAC cell models. It promotes aerobic glycolysis and EMT by sponging hsa-miR-143-3p and regulating DNMT3A, suggesting potential value as a targeted therapeutic biomarker.

Confidence score:

0.7716

Other information
Title:

Hsa_circ_0084003 modulates glycolysis and epithelial-mesenchymal transition in pancreatic ductal adenocarcinoma through targeting hsa-miR-143-3p/DNMT3A axis.

Journal: Toxicology research
Published: 2023
PubMed ID: 37397922
Study type:

biological research

Data availability: The data sets used or analyzed during the current study are available from the corresponding author on reasonable request.
Code availability: Not applicable.