circRNA basic information
circBase ID: hsa_circ_0084615
Name: -
Synonym: circ_0084615
Host Gene: -
Genomic location(hg19): chr8:62593526-62596747:-
Genomic location(hg38): chr8:61680967-61684188:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC patient tumor tissues; adjacent non-tumor tissues; HCC tissue samples; normal tissue samples

Cell lines:

HL7702; L-02; BEL-7404; 7404; 7404BAP; MHCC-97H

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: MEF2D, AGO2
Associated microRNA: miR-451a
Biological function: circ_0084615 functions as a miRNA sponge in B[a]P-treated liver cancer cells and contributes to hepatocarcinogenesis through regulation of miR-451a and MEF2D.
Molecular mechanism: circ_0084615 acts as a miRNA sponge for miR-451a and regulates the downstream target MEF2D in a circRNA-miRNA-mRNA axis.
Biological pathway or process:

ceRNA regulation (promotes); immune regulation (other); other pathway/process (promotes)

Detected method:
Q
M
Validation methods:

RNase R Treatment; RT-qPCR; Microarray; FISH / smFISH; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; Western Blot; Bioinformatics Analysis

Clinical significance:

The circ_0084615/miR-451a/MEF2D axis may provide insight into B[a]P-induced liver cancer and potential food contaminant-related disease mechanisms, but no direct diagnostic or prognostic clinical association for circ_0084615 expression was reported.

Description:

circ_0084615 is up-regulated in B[a]P-treated liver cancer cells and localizes to the cytoplasm. The study supports a circ_0084615/miR-451a/MEF2D regulatory axis that may contribute to B[a]P-associated hepatocarcinogenesis.

Confidence score:

0.7006

Other information
Title:

Comprehensive analysis and identification of the circ_0084615/miR-451a/MEF2D axis in benzo(a)pyrene exposed tumor cells in hepato-carcinogenesis.

Journal: Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association
Published: 2023
PubMed ID: 37146711
Study type:

combined biological and bioinformatics study

Data availability: GSE155949; GSE94520; TCGA; GTEx; Data will be made available on request.
Code availability: -