circRNA basic information
circBase ID: hsa_circ_0064636
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr3:29781210-29941246:+
Genomic location(hg38): chr3:29739719-29899755:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma / OS
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

hFOB1.19; HOS; SJSA-1; MG63

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: UBE4A, VDAC1
Associated microRNA: miR-326, miR-503-5p
Biological function: May promote osteosarcoma development by sponging miR-326 and miR-503-5p, thereby increasing VDAC1 and UBE4A expression.
Molecular mechanism: Predicted ceRNA mechanism: hsa_circ_0064636 sponges miR-326 and miR-503-5p to relieve repression of UBE4A and VDAC1, respectively; regulatory network not experimentally validated beyond expression RT-qPCR.
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
Validation methods:

divergent primers PCR; RT-qPCR; Bioinformatics Analysis

Clinical significance:

A circRNA/miRNA/mRNA interaction sub-network starting with hsa_circ_0064636 was identified with prognostic significance based on survival analysis of target genes (UBE4A, VDAC1).

Description:

hsa_circ_0064636 is up-regulated in osteosarcoma cell lines. The study proposes a ceRNA sub-network in which hsa_circ_0064636 sponges miR-326 and miR-503-5p to regulate UBE4A and VDAC1, respectively, and highlights prognostic relevance through downstream target-gene survival analyses.

Confidence score:

0.329

Other information
Title:

Hsa_circ_0064636 regulates voltage dependent anion channel 1/ubiquitination factor E4A through miR‑326/miR‑503‑5 in osteosarcoma.

Journal: Oncology letters
Published: 2024
PubMed ID: 38910902
Study type:

combined biological and bioinformatics study

Data availability: GSE16088; GSE65071
Code availability: -