circRNA basic information
circBase ID: hsa_circ_0000284
Name: hsa_circ_HIPK3
Synonym: circHIPK3 / circ_0000284
Host Gene: HIPK3
Genomic location(hg19): chr11:33307958-33309057:+
Genomic location(hg38): chr11:33286412-33287511:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005010
MONDO name: coronary artery disorder
Disease details: coronary artery disease / CAD
Disease DO ID:
3393
Disease MeSH ID:
D003324
Disease NCIt ID:
C26732
Disease ICD11 ID:
1059873720
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood leukocytes / PBLs

Cell lines:

EA-hy926; HEK293T; TOP10

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: ETS1
Associated microRNA: hsa-miRNA-338-3p
Biological function: hsa_circRNA_0000284 promotes EA-hy926 cell proliferation and cell cycle progression, inhibits senescence and apoptosis, and its downregulation may contribute to endothelial cell damage in CHD.
Molecular mechanism: hsa_circRNA_0000284 acts as a ceRNA by sponging hsa-miRNA-338-3p and regulating the downstream target gene ETS1, with AluSq2 affecting circRNA formation and expression.
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); apoptosis (inhibits); ceRNA regulation (other); other pathway/process (inhibits)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis; FISH / smFISH; Luciferase Reporter Assay; Transfection; CCK8; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Western Blot; Sanger Sequencing

Clinical significance:

hsa_circRNA_0000284 is downregulated in PBLs from CHD patients and may be associated with CHD pathogenesis and potential diagnosis or treatment targets.

Description:

In CHD, hsa_circRNA_0000284 is downregulated in peripheral blood leukocytes. Functionally, hsa_circRNA_0000284 supports endothelial cell proliferation and cell cycle progression while suppressing senescence and apoptosis. Mechanistically, it acts as a ceRNA for hsa-miRNA-338-3p to regulate ETS1 expression, suggesting a role for the hsa_circRNA_0000284/hsa-miRNA-338-3p/ETS1 axis in CHD pathogenesis.

Confidence score:

0.7404

Other information
Title:

Hsa_circRNA_0000284 acts as a ceRNA to participate in coronary heart disease progression by sponging miRNA-338-3p via regulating the expression of ETS1.

Journal: Journal of biomolecular structure & dynamics
Published: 2024
PubMed ID: 37334706
Study type:

combined biological and clinical study

Data availability: GSE61741; GSE56885; datasets utilized and analyzed in this study are not publicly accessible
Code availability: -