circRNA basic information
circBase ID: hsa_circ_0001955
Name: hsa_circ_CSNK1G1
Synonym: circCSNK1G1
Host Gene: CSNK1G1
Genomic location(hg19): chr15:64495280-64508912:-
Genomic location(hg38): chr15:64203081-64216713:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tumor tissues; paired normal tissues

Cell lines:

HCT116; SW620; NCM460

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MYO6
Associated microRNA: miR-455-3p
Biological function: promotes CRC cell proliferation, migration and invasion; inhibits apoptosis; promotes tumor growth in vivo
Molecular mechanism: ceRNA (miRNA sponge) mechanism: circCSNK1G1 sponges miR-455-3p to increase MYO6 expression
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); cell cycle (promotes); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Bioinformatics Analysis; Luciferase Reporter Assay; RNA Pull-Down; Transfection; MTT; Colony Formation Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Clinical Sample Validation

Clinical significance:

circCSNK1G1 might be a useful biomarker for CRC treatment

Description:

circCSNK1G1 is up-regulated in colorectal cancer tissues and cell lines and mainly localizes to the cytoplasm. It promotes malignant phenotypes and xenograft tumor growth by sponging miR-455-3p, thereby increasing MYO6 expression (circCSNK1G1/miR-455-3p/MYO6 axis).

Confidence score:

0.8207

Other information
Title:

CircCSNK1G1 Contributes to the Development of Colorectal Cancer by Increasing the Expression of MYO6 via Competitively Targeting miR-455-3p.

Journal: Cancer management and research
Published: 2020
PubMed ID: 33061642
Study type:

combined biological and clinical study

Data availability: GSE126094
Code availability: -