circRNA basic information
circBase ID: hsa_circ_0008216
Name: hsa_circ_SMG1
Synonym: circular RNA-SMG1.72 / circRNA-SMG1.72
Host Gene: SMG1
Genomic location(hg19): chr16:18851019-18853776:-
Genomic location(hg38): chr16:18839697-18842454:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC patient samples; tumor tissues; normal tissues; tumorfree tissue; liver; mesentery; spleen; kidney; stomach

Cell lines:

SK-HEP-1; HA22T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: ERalpha, SMG1, GSN, GSN-mRNA, Argonaute 2
Associated microRNA: miR-141-3p
Biological function: circRNA-SMG1.72 promotes HCC cell invasion and metastasis; knockdown of circRNA-SMG1.72 decreases GSN expression and suppresses invasion, while overexpression increases GSN expression and invasion.
Molecular mechanism: ERalpha transcriptionally suppresses circRNA-SMG1.72 expression by binding the SMG1 promoter; circRNA-SMG1.72 acts as a ceRNA sponge for miR-141-3p, relieving miR-141-3p-mediated repression of GSN mRNA translation and thereby increasing GSN expression.
Biological pathway or process:

invasion (promotes); metastasis (promotes); ceRNA regulation (other)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; RT-qPCR; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; ChIP / ChIP-seq; Luciferase Reporter Assay; Transfection; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Western Blot; Bioinformatics Analysis

Clinical significance:

Elevated circSMG1.72 in HCC patients may contribute to HCC invasion through the miR-141-3p/GSN axis, and targeting circ-SMG1.72 may be a potential treatment strategy for HCC, especially ER-low tumors.

Description:

In HCC, circRNA-SMG1.72 is elevated and functions as a pro-invasive circRNA. ERalpha suppresses circRNA-SMG1.72 by transcriptional regulation of its host gene SMG1, while circRNA-SMG1.72 sponges miR-141-3p to relieve repression of GSN and promote HCC invasion and metastasis. Targeting the ERalpha/circRNA-SMG1.72/miR-141-3p/GSN axis may help suppress HCC progression, especially in ER-low tumors.

Confidence score:

0.8468

Other information
Title:

Targeting the estrogen receptor alpha (ERalpha)-mediated circ-SMG1.72/miR-141-3p/Gelsolin signaling to better suppress the HCC cell invasion.

Journal: Oncogene
Published: 2020
PubMed ID: 31996784
Study type:

combined biological and clinical study

Data availability: TCGA website: http://cancergenome.nih.gov/
Code availability: -