circRNA basic information
circBase ID: hsa_circ_0058124
Name: hsa_circ_FN1
Synonym: -
Host Gene: FN1
Genomic location(hg19): chr2:216270960-216274462:-
Genomic location(hg38): chr2:215406237-215409739:-
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005075
MONDO name: thyroid gland papillary carcinoma
Disease details: papillary thyroid cancer
Disease DO ID:
3969
Disease MeSH ID:
-
Disease NCIt ID:
C4035
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PTC tissue; adjacent normal tissue

Cell lines:

TPC-1; K1; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: NUMB, NOTCH3, HES1, GATAD2A
Associated microRNA: miR-218-5p, miR-665
Biological function: promotes PTC cell proliferation, tumorigenicity, migration, invasion, and metastasis; increases cell viability; inhibits apoptosis
Molecular mechanism: ceRNA mechanism: hsa_circ_0058124 sponges miR-218-5p to modulate NUMB and suppress the NOTCH3/GATAD2A axis
Biological pathway or process:

Notch (inhibits); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; RNase R Treatment; divergent primers PCR; Sanger Sequencing; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Wound Healing Assay; RNA-seq; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Clinical Sample Validation

Clinical significance:

hsa_circ_0058124 upregulation is correlated with unfavorable prognosis and is a potential prognostic biomarker in PTC

Description:

hsa_circ_0058124 is up-regulated in papillary thyroid cancer and correlates with unfavorable prognosis. It promotes proliferation and malignant behaviors by acting as a ceRNA (sponging miR-218-5p) to increase NUMB and thereby suppress the NOTCH3/GATAD2A axis, validated in vitro and in a xenograft model.

Confidence score:

0.8442

Other information
Title:

Hsa_circ_0058124 promotes papillary thyroid cancer tumorigenesis and invasiveness through the NOTCH3/GATAD2A axis.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2019
PubMed ID: 31324198
Study type:

combined biological and clinical study

Data availability: -
Code availability: -