circRNA basic information
circBase ID: hsa_circ_0104206
Name: hsa_circ_CSNK1G1
Synonym: circ_0104206
Host Gene: CSNK1G1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0021063
MONDO name: malignant colon neoplasm
Disease details: colon cancer
Disease DO ID:
219
Disease MeSH ID:
-
Disease NCIt ID:
C9242
Disease ICD11 ID:
1265576634
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor samples; normal tissues

Cell lines:

HCT-8; SW620; HCT-116; SW480; FHC

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CCNA2
Associated microRNA: miR-188-3p
Biological function: Circ_0104206 promotes CC cell proliferation, colony formation, migration, and in vivo tumor development.
Molecular mechanism: Circ_0104206 functions as an oncogenic circRNA by targeting miR-188-3p and governing the downstream CCNA2 network.
Biological pathway or process:

proliferation (promotes); migration (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Western Blot; In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

Circ_0104206 may be a potential marker for CC, but its clinical implications need further evidence.

Description:

Circ_0104206 is up-regulated in colon cancer tissues and cell lines. It acts as an oncogenic circRNA that promotes CC cell proliferation, colony formation, migration, and xenograft tumor growth, at least partly through the miR-188-3p/CCNA2 regulatory axis.

Confidence score:

0.7795

Other information
Title:

Hsa_Circ_0104206 is An Oncogenic circRNA in Colon Cancer by Targeting Mir-188-3p/CCNA2 Axis.

Journal: Hormone and metabolic research = Hormon- und Stoffwechselforschung = Hormones et metabolisme
Published: 2023
PubMed ID: 37276868
Study type:

combined biological and clinical study

Data availability: GSE126094
Code availability: -