circRNA basic information
circBase ID: -
Name: hsa_circ_WHSC1
Synonym: circWHSC1
Host Gene: WHSC1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues

Cell lines:

FHC-1; SW480; SW620; HCT-116; HT-29; DLD-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: zeb1
Associated microRNA: miR-130a-5p
Biological function: Facilitates colorectal cancer cell proliferation and promotes migration and invasion; circWHSC1 knockdown promotes apoptosis and causes G0/G1 arrest; enhances tumor growth in nude mice.
Molecular mechanism: Acts as a miRNA sponge for miR-130a-5p to promote zeb1 expression, supporting a ceRNA mechanism; phenotypes rescued by miR-130a-5p inhibition or zeb1 overexpression.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); EMT (promotes); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; FISH / smFISH; Transfection; CCK8; Colony Formation Assay; EdU Staining; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Transwell Assay; Wound Healing Assay; Western Blot; Luciferase Reporter Assay; RNA Pull-Down; In Vivo Animal Model; IHC (Immunohistochemistry); Bioinformatics Analysis

Clinical significance:

-

Description:

circWHSC1 is up-regulated in colorectal cancer cell lines and predominantly localizes to the cytoplasm. It promotes CRC cell proliferation, migration/invasion and tumor growth by sponging miR-130a-5p and thereby increasing zeb1 expression; miR-130a-5p inhibition or zeb1 overexpression rescues circWHSC1-knockdown phenotypes.

Confidence score:

0.7801

Other information
Title:

Circular RNA circWHSC1 facilitates colorectal cancer cell proliferation by targeting miR-130a-5p/zeb1 signaling in vitro and in vivo.

Journal: Heliyon
Published: 2023
PubMed ID: 37810854
Study type:

biological research

Data availability: Data included in article/supp. material/referenced in article.
Code availability: -