circRNA basic information
circBase ID: hsa_circ_0071803
Name: hsa_circ_SEMA5A
Synonym: circ_0071803 / circSEMA5A
Host Gene: SEMA5A
Genomic location(hg19): chr5:9051984-9437964:-
Genomic location(hg38): chr5:9051872-9437852:-
Subcellular localization: nucleus
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tumor tissues; xenograft tumor tissue

Cell lines:

LoVo; SW620; SW480; Caco-2; NCM460

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CCNE1, Ago2
Associated microRNA: miR-195-5p
Biological function: promotes CRC cell proliferation, migration, invasion, malignant phenotype, tumorigenesis and tumor growth; circSEMA5A silencing represses tumor metastasis and reduces xenograft tumor growth
Molecular mechanism: circSEMA5A acts as a ceRNA/miRNA sponge by competitively binding miR-195-5p, thereby upregulating CCNE1 expression
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); cell cycle (promotes)

Detected method:
Q
M
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; Transfection; Colony Formation Assay; CCK8; Transwell Assay; Wound Healing Assay; RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Bioinformatics Analysis

Clinical significance:

providing a new direction for CRC diagnosis and targeted therapy; potential new direction for seeking therapeutic plans to treat CRC

Description:

circSEMA5A is up-regulated in CRC cells and functions as an oncogenic circRNA. It promotes proliferation, migration, invasion and xenograft tumor growth by sponging miR-195-5p and increasing CCNE1 expression, suggesting potential relevance for CRC targeted therapy.

Confidence score:

0.8354

Other information
Title:

Circular RNA circSEMA5A facilitates colorectal cancer development by regulating microRNA-195-5p to target CCNE1 axis.

Journal: Cellular signalling
Published: 2023
PubMed ID: 37164546
Study type:

combined biological and bioinformatics study

Data availability: GSE172229; GSE138589; TCGA-COAD; TCGA-READ; TCGA-colon adenocarcinoma [COAD]
Code availability: -