circRNA basic information
circBase ID: hsa_circ_0049224
Name: hsa_circ_DNMT1
Synonym: circDNMT1
Host Gene: DNMT1
Genomic location(hg19): chr19:10286215-10288043:-
Genomic location(hg38): chr19:10175539-10177367:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal tissues

Cell lines:

HGC-27; AGS; MKN-45; MKN-28; MGC-803; BGC-823; GES-1; luc-HGC-27

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HIF-1alpha
Associated microRNA: miR-576-3p
Biological function: promotes proliferation, migration, invasion and glycolysis of gastric cancer cells; promotes tumor growth and metastasis in vivo
Molecular mechanism: ceRNA/miRNA sponge: circDNMT1 sponges miR-576-3p, relieving miR-576-3p-mediated repression of HIF-1alpha
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); glycolysis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Sanger Sequencing; FISH / smFISH; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Gel electrophoresis; Clinical Sample Validation; Survival Analysis; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Wound Healing Assay; Transwell Assay; Western Blot; In Vivo Animal Model

Clinical significance:

High expression of circDNMT1 indicated poorer patient survival time; correlated with pathological T stage and pathological TNM stage

Description:

circDNMT1 (Hsa_circ_0049224), derived from DNMT1, is up-regulated in gastric cancer tissues and cell lines and mainly localized in the cytoplasm. It promotes GC proliferation, migration, invasion and glycolysis by sponging miR-576-3p to derepress HIF-1alpha, enhancing tumor growth and metastasis in xenograft models, and high circDNMT1 is associated with poorer overall survival.

Confidence score:

0.8521

Other information
Title:

circDNMT1 Promotes Malignant Progression of Gastric Cancer Through Targeting miR-576-3p/Hypoxia Inducible Factor-1 Alpha Axis.

Journal: Frontiers in oncology
Published: 2022
PubMed ID: 35712504
Study type:

combined biological and clinical study

Data availability: https://www.frontiersin.org/articles/10.3389/fonc.2022.817192/full#supplementary-material
Code availability: -