circRNA basic information
circBase ID: -
Name: -
Synonym: circRNA_102231
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal tissues; plasma

Cell lines:

AGS; MKN45

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: IRTKS
Associated microRNA: -
Biological function: promotes GC cell proliferation and invasion; enhances tumor growth in vivo
Molecular mechanism: binds IRTKS protein and increases IRTKS protein stability (extends half-life), preventing degradation; IRTKS overexpression rescues phenotypes caused by circRNA_102231 knockdown
Biological pathway or process:

proliferation (promotes); invasion (promotes); metastasis (promotes); other pathway/process (promotes)

Detected method:
Q
Validation methods:

Bioinformatics Analysis; RT-qPCR; Clinical Sample Validation; CCK8; Colony Formation Assay; EdU Staining; Transwell Assay; RNA Pull-Down; RIP (RNA Immunoprecipitation); Western Blot; Transfection; In Vivo Animal Model; Survival Analysis; ROC Analysis

Clinical significance:

High circRNA_102231 was associated with larger tumor volume, lymph node metastasis, higher clinical stage; high circRNA_102231 had shorter survival time; plasma circRNA_102231 showed diagnostic value (AUC 0.9032).

Description:

circRNA_102231 is up-regulated in gastric cancer tissues and patient plasma and is associated with worse clinical outcomes. It promotes GC proliferation, invasion and tumor growth by binding the oncoprotein IRTKS and increasing its protein stability/half-life, and IRTKS overexpression rescues the effects of circRNA_102231 knockdown.

Confidence score:

0.7793

Other information
Title:

Upregulated circRNA_102231 promotes gastric cancer progression and its clinical significance.

Journal: Bioengineered
Published: 2021
PubMed ID: 34374630
Study type:

combined biological and clinical study

Data availability: GSE152309; GSE141977; GSE121445
Code availability: -