circRNA basic information
circBase ID: hsa_circ_0029069
Name: hsa_circ_CLIP1
Synonym: circCLIP1
Host Gene: CLIP1
Genomic location(hg19): chr12:122825299-122826244:-
Genomic location(hg38): chr12:122340752-122341697:-
Subcellular localization: nucleus and cytoplasm; exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005087
MONDO name: respiratory system disorder
Disease details: PM2.5-induced airway obstruction
Disease DO ID:
1579
Disease MeSH ID:
D012140
Disease NCIt ID:
C26871
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma

Cell lines:

HBE; HBSMCs

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: SEPT10, METTL3
Associated microRNA: -
Biological function: Exosomal circCLIP1 promotes PM2.5-induced mucus secretion in recipient HBE cells and contractility of sensitive HBSMCs.
Molecular mechanism: PM2.5 increases METTL3-mediated m6A modification of circCLIP1, upregulating exosomal circCLIP1; exosome-transmitted circCLIP1 is internalized by recipient cells and enhances SEPT10 expression to induce mucus hypersecretion and smooth muscle contractility.
Biological pathway or process:

m6A modification (promotes); other pathway/process (promotes)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; RNA-seq; FISH / smFISH; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; MeRIP / MeRIP-seq; Transfection; ELISA; Western Blot; Bioinformatics Analysis

Clinical significance:

Exosomal circCLIP1 was associated with acute PM2.5 exposure in paired human plasma samples and was proposed as a potential biomarker for PM2.5-related adverse effects.

Description:

This study identifies exosomal circCLIP1, derived from CLIP1, as an up-regulated circRNA after PM2.5 exposure. METTL3-mediated m6A modification increases circCLIP1 expression and exosomal abundance, and exosome-transmitted circCLIP1 promotes mucus hypersecretion in HBE cells and contractility in sensitive HBSMCs by enhancing SEPT10. Human plasma data suggest exosomal circCLIP1 may serve as a biomarker of PM2.5-related adverse effects.

Confidence score:

0.8414

Other information
Title:

Exosomal circCLIP1 regulates PM2.5-induced airway obstruction via targeting SEPT10 in vitro.

Journal: Ecotoxicology and environmental safety
Published: 2023
PubMed ID: 36950992
Study type:

combined biological and clinical study

Data availability: Data will be made available on request; Supplementary data associated with this article can be found in the online version at doi:10.1016/j.ecoenv.2023.114750
Code availability: -