circRNA basic information
circBase ID: -
Name: hsa_circ_EPB41L5
Synonym: -
Host Gene: EPB41L5
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0018177
MONDO name: glioblastoma
Disease details: glioblastoma
Disease DO ID:
3068
Disease MeSH ID:
D005909
Disease NCIt ID:
C3058
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

glioblastoma tissues; normal brain tissues

Cell lines:

U87; T98G; A172; LN229; U251; U373; 293T; NHA

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: EPB41L5, RhoC, AKT, phospho-AKT
Associated microRNA: miR-19a
Biological function: Inhibits glioblastoma cell proliferation, colony formation, migration and invasion, and suppresses tumorigenesis in vivo.
Molecular mechanism: Acts as a miRNA sponge for miR-19a to relieve miR-19a-mediated repression of host gene EPB41L5, thereby inhibiting RhoC and p-AKT signaling.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); PI3K/AKT (inhibits); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; RNA Pull-Down; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Western Blot; In Vivo Animal Model; H&E Staining; Survival Analysis; Bioinformatics Analysis; Clinical Sample Validation; Cohort Study

Clinical significance:

Low circ-EPB41L5 expression is associated with poor prognosis and is an independent prognostic factor for poor PFS and OS in glioblastoma patients.

Description:

Circ-EPB41L5 is down-regulated in glioblastoma and functions as a tumor suppressor. It mainly localizes to the cytoplasm and sponges miR-19a, thereby increasing EPB41L5 expression and suppressing downstream RhoC and AKT phosphorylation, leading to reduced proliferation, migration, invasion, and tumorigenesis. Low circ-EPB41L5 levels are associated with worse patient survival.

Confidence score:

0.8426

Other information
Title:

Circ-EPB41L5 regulates the host gene EPB41L5 via sponging miR-19a to repress glioblastoma tumorigenesis.

Journal: Aging
Published: 2020
PubMed ID: 31905344
Study type:

combined biological and clinical study

Data availability: TCGA; GEO; Rembrandt
Code availability: -