circRNA basic information
circBase ID: hsa_circ_0003204
Name: hsa_circ_USP36
Synonym: -
Host Gene: USP36
Genomic location(hg19): chr17:76798405-76800060:-
Genomic location(hg38): chr17:78802323-78803978:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005311
MONDO name: atherosclerosis
Disease details: atherosclerosis
Disease DO ID:
1936
Disease MeSH ID:
D050197
Disease NCIt ID:
C35768
Disease ICD11 ID:
109367356
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma EVs

Cell lines:

HAECs; HEK-293 T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: TGFbetaR2, phosph-SMAD3, Ago2
Associated microRNA: miR-370-3p / miR-370
Biological function: inhibits proliferation, migration and tube formation of ox-LDL-exposed HAECs
Molecular mechanism: Acts as a miRNA sponge (ceRNA) for miR-370 to promote TGFbetaR2 and downstream phosph-SMAD3 expression.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); angiogenesis (inhibits); TGF-beta/SMAD (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; Sanger Sequencing; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; Transwell Assay; Wound Healing Assay; Tube Formation Assay; Western Blot; Clinical Sample Validation; ROC Analysis; Survival Analysis; Bioinformatics Analysis

Clinical significance:

Upregulated in plasma EVs of patients with cerebral atherosclerosis and shows diagnostic/prognostic potential (ROC; higher expression associated with more end events).

Description:

In ox-LDL-treated human aorta endothelial cells and in plasma extracellular vesicles from cerebral atherosclerosis patients, circ_0003204 is upregulated. It mainly localizes to the cytoplasm and suppresses endothelial proliferation, migration, and tube formation by acting as a ceRNA for miR-370-3p, thereby increasing TGFbetaR2 and downstream phospho-SMAD3 signaling. Clinically, higher EV circ_0003204 shows diagnostic value and is associated with worse event-free outcome in cerebral atherosclerosis patients.

Confidence score:

0.8766

Other information
Title:

Circular RNA circ_0003204 inhibits proliferation, migration and tube formation of endothelial cell in atherosclerosis via miR-370-3p/TGFbetaR2/phosph-SMAD3 axis.

Journal: Journal of biomedical science
Published: 2020
PubMed ID: 31900142
Study type:

combined biological and clinical study

Data availability: GSE13139; GSE28829; GSE34645; GSE34644; GSE34646; Supplementary information accompanies this paper at 10.1186/s12929-019-0595-9
Code availability: -