circRNA basic information
circBase ID: hsa_circ_0005699
Name: hsa_circ_C16orf62
Synonym: circ_C16orf62
Host Gene: C16orf62
Genomic location(hg19): chr16:19627435-19663412:+
Genomic location(hg38): chr16:19616113-19652090:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: Gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tumor tissues; adjacent normal tissues; xenograft tumor tissues

Cell lines:

MKN-74; HGC-27; AGS; GES-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: TUBB2A
Associated microRNA: miR-421
Biological function: Suppresses proliferation, migration, and invasion of gastric cancer cells and inhibits tumor growth in vivo.
Molecular mechanism: Acts as a miR-421 sponge to upregulate TUBB2A, thereby suppressing gastric cancer progression.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Transfection; MTT; Colony Formation Assay; Transwell Assay; Luciferase Reporter Assay; Western Blot; In Vivo Animal Model; Clinical Sample Validation

Clinical significance:

-

Description:

circ_C16orf62 is down-regulated in gastric cancer tissues and cell lines and mainly localizes to the cytoplasm. It suppresses GC cell proliferation, migration and invasion and inhibits xenograft tumor growth by sponging miR-421 to increase TUBB2A expression.

Confidence score:

0.7223

Other information
Title:

Circular RNA circ_C16orf62 Suppresses Cell Growth in Gastric Cancer by miR-421/Tubulin beta-2A Chain (TUBB2A) Axis.

Journal: Medical science monitor : international medical journal of experimental and clinical research
Published: 2020
PubMed ID: 33006960
Study type:

combined biological and clinical study

Data availability: -
Code availability: -