circRNA basic information
circBase ID: hsa_circ_0000979
Name: -
Synonym: hsa_circRNA_001587 / circRNA0000979
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent tissues; gastric tumor tissues; resected tumors

Cell lines:

GSE-1; AGS; HGC27; MKN-45; MKN74; HGC-27; HEK 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SP1 mRNA, SP1, AGO2, E-cadherin, N-cadherin, vimentin, snail
Associated microRNA: miR-136
Biological function: Promotes gastric cancer cell proliferation, migration, invasion/metastasis and in vivo tumor growth; acts as an oncogenic circRNA and potential therapeutic target.
Molecular mechanism: circ-0000979 functions as a cytoplasmic ceRNA that sponges miR-136, reduces miR-136 activity/expression, and modulates SP1 mRNA/protein expression, thereby promoting gastric cancer progression and EMT-related marker changes.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); EMT (promotes)

Detected method:
Q
M
Validation methods:

RNase R Treatment; RT-qPCR; Microarray; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circ-0000979 expression is associated with poorer prognosis and significantly correlated with GC staging, grade, and lymph node metastasis; circ-0000979 might be a predictive marker and RNA therapeutic target for gastric cancer.

Description:

circ-0000979 is up-regulated in gastric cancer tissues and cell lines, and high expression is associated with poorer prognosis and clinicopathological progression. Mechanistically, cytoplasmic circ-0000979 promotes GC proliferation, migration, invasion/metastasis and xenograft tumor growth by sponging miR-136 and regulating SP1 mRNA/protein expression.

Confidence score:

0.8554

Other information
Title:

Circ-0000979 promotes the development of gastric carcinoma by sponging miR-136 and modulating SP1 mRNA expression level.

Journal: Histology and histopathology
Published: 2023
PubMed ID: 36629013
Study type:

combined biological and clinical study

Data availability: GSE78092; datasets available from the corresponding author on reasonable request
Code availability: -