circRNA basic information
circBase ID: hsa_circ_0004662
Name: hsa_circ_SOD2
Synonym: circSOD2 / hsa_circRNA_004662
Host Gene: SOD2
Genomic location(hg19): chr6:160103505-160109274:-
Genomic location(hg38): chr6:159682473-159688242:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005005
MONDO name: clear cell renal carcinoma
Disease details: clear cell renal cell carcinoma / ccRCC
Disease DO ID:
4467
Disease MeSH ID:
-
Disease NCIt ID:
C4033
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ccRCC tissues; adjacent normal kidney tissues

Cell lines:

786-O; 769P; Caki-1; A498; ACHN; HK2; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PAX5
Associated microRNA: miR-532-3p
Biological function: promotes proliferation, migration and invasion; inhibits apoptosis; promotes metastasis
Molecular mechanism: ceRNA sponge of miR-532-3p to regulate PAX5; positive feedback loop with transcription factor PAX5 enhancing circSOD2 biogenesis; activation of PI3K-AKT-mTOR signaling
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); metastasis (promotes); PI3K/AKT/mTOR (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Sanger Sequencing; Back-Splice Junction PCR / divergent primers PCR; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; Actinomycin D / DRB Stability Assay; Transfection; RNA Pull-Down; Luciferase Reporter Assay; Western Blot; CCK8; Transwell Assay; Annexin V/PI Flow Cytometry; In Vivo Animal Model; H&E Staining; ChIP / ChIP-seq; RNA-seq; Survival Analysis; ROC Analysis; Bioinformatics Analysis; Clinical Sample Validation; Cohort Study

Clinical significance:

Higher circSOD2 expression is correlated with advanced tumor stage/grade and worse survival outcomes (OS and DFS); circSOD2 expression can predict OS with high accuracy (ROC).

Description:

circSOD2 is up-regulated in ccRCC and promotes malignant phenotypes (proliferation, invasion/migration, metastasis) while inhibiting apoptosis. Mechanistically, circSOD2 sponges miR-532-3p to relieve repression of PAX5, and PAX5 transcriptionally enhances circSOD2 biogenesis, forming a positive feedback loop and associated PI3K/AKT/mTOR activation. High circSOD2 expression correlates with advanced stage/grade and poorer OS/DFS.

Confidence score:

0.8988

Other information
Title:

Exploring the oncogenic potential of circSOD2 in clear cell renal cell carcinoma: a novel positive feedback loop.

Journal: Journal of translational medicine
Published: 2024
PubMed ID: 38926764
Study type:

combined biological and clinical study

Data availability: GSE100186; GSE137836; GSE199053; TCGA
Code availability: -