circRNA basic information
circBase ID: hsa_circ_0066436
Name: hsa_circ_ATXN7
Synonym: circATXN7 / hsa_circATXN7_010
Host Gene: ATXN7
Genomic location(hg19): chr3:63973734-63976535:+
Genomic location(hg38): chr3:63988058-63990859:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissues; adjacent nontumor tissues; xenograft tumors

Cell lines:

16HBE; NCI-H460; NCI-H1299; LK-2; A549

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PFN2, Ago2
Associated microRNA: miR-7-5p
Biological function: promotes proliferation, metastasis, invasion, and EMT; inhibits apoptosis; promotes tumor growth in vivo
Molecular mechanism: circATXN7 acts as a miR-7-5p sponge to upregulate PFN2
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); EMT (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; Colony Formation Assay; EdU Staining; Annexin V/PI Flow Cytometry; Transwell Assay; Western Blot; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); In Vivo Animal Model; IHC (Immunohistochemistry); Clinical Sample Validation

Clinical significance:

high circATXN7 level is associated with TNM grade, lymph node metastasis, and tumor size

Description:

circATXN7 is up-regulated in NSCLC tissues and cell lines and mainly localizes to the cytoplasm. It promotes NSCLC proliferation, invasion/metastasis and EMT while inhibiting apoptosis, partly by sponging miR-7-5p to de-repress PFN2; circATXN7 knockdown suppresses xenograft tumor growth.

Confidence score:

0.8039

Other information
Title:

Downregulation of circATXN7 represses non-small cell lung cancer growth by releasing miR-7-5p.

Journal: Thoracic cancer
Published: 2022
PubMed ID: 35445786
Study type:

combined biological and clinical study

Data availability: -
Code availability: -