circRNA basic information
circBase ID: hsa_circ_0001610
Name: hsa_circ_TNFRSF21
Synonym: circ_0001610
Host Gene: TNFRSF21
Genomic location(hg19): chr6:47251673-47254331:-
Genomic location(hg38): chr6:47283937-47286595:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

paired gastric cancer and normal tissues; gastric cancer specimens; normal tissues

Cell lines:

HGC-27; MKN-45

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: circPDIA4, DHX9
Associated microRNA: -
Biological function: Acts as an oncogenic circRNA that promotes invasive activity of gastric cancer cells downstream of circPDIA4/DHX9-dependent circRNA biogenesis.
Molecular mechanism: circPDIA4-mediated upregulation of circ_0001610 depends on DHX9 protein; silencing circ_0001610 rescues circPDIA4-driven invasion.
Biological pathway or process:

invasion (promotes); other pathway/process (promotes)

Detected method:
Q
S
Validation methods:

circRNA-seq; RT-qPCR; Clinical Sample Validation; Transfection; Transwell Assay; Bioinformatics Analysis

Clinical significance:

circ_0001610 is up-regulated in gastric cancer specimens and positively correlated with circPDIA4 expression.

Description:

hsa_circ_0001610/circ_0001610 is up-regulated in gastric cancer tissues and is induced by circPDIA4 through a DHX9-dependent mechanism. Functional rescue experiments indicate that circ_0001610 contributes to circPDIA4-driven invasive activity in gastric cancer cells.

Confidence score:

0.6102

Other information
Title:

CircPDIA4 Induces Gastric Cancer Progression by Promoting ERK1/2 Activation and Enhancing Biogenesis of Oncogenic circRNAs.

Journal: Cancer research
Published: 2023
PubMed ID: 36562654
Study type:

combined biological and clinical study

Data availability: Genome Sequence Archive-human HRA002373; https://ngdc.cncb.ac.cn/gsa-human/
Code availability: -