circRNA basic information
circBase ID: -
Name: hsa_circ_LRBA
Synonym: circLRBA
Host Gene: LRBA
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004781
MONDO name: acute myocardial infarction
Disease details: acute myocardial infarction / AMI
Disease DO ID:
9408
Disease MeSH ID:
-
Disease NCIt ID:
C35204
Disease ICD11 ID:
1334938734
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

myocardial tissues; heart tissues; human myocardium; mice hearts

Cell lines:

-

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: Potential biomarker for postmortem diagnosis of AMI; can distinguish AMI and normal control cases, including early-MI cases.
Molecular mechanism: No disease mechanism was explored; the study focused on forensic diagnostic application and circRNA stability due to loop structure.
Biological pathway or process:

not specified (other)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; RT-qPCR; Clinical Sample Validation; In Vivo Animal Model; H&E Staining; ROC Analysis; Bioinformatics Analysis

Clinical significance:

circLRBA is a potential biomarker for postmortem diagnosis of AMI, with ROC AUC values of 0.862 for MI, 0.767 for early-MI, and 0.817 for MI + early-MI.

Description:

circLRBA was screened from GEO AMI circRNA expression data and validated as a stable circular RNA. Its expression decreased in mouse AMI models and in human forensic MI and early-MI autopsy cases, supporting its value as a postmortem diagnostic biomarker for AMI.

Confidence score:

0.7241

Other information
Title:

CircSMARCC1 and CircLRBA are potential biomarkers in forensic postmortem diagnosis of acute myocardial infarction.

Journal: Legal medicine (Tokyo, Japan)
Published: 2023
PubMed ID: 36502647
Study type:

combined biological and clinical study

Data availability: GSE160717
Code availability: -