circRNA basic information
circBase ID: -
Name: hsa_circ_FAM13B
Synonym: circFAM13B
Host Gene: FAM13B
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005180
MONDO name: Parkinson disease
Disease details: Parkinson’s disease / PD
Disease DO ID:
14330
Disease MeSH ID:
D010300
Disease NCIt ID:
C26845
Disease ICD11 ID:
296066191
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

blood

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: FAM13B (linear form)
Associated microRNA: -
Biological function: Potential biomarker and implicated in PD pathogenesis; signal remains significant after adjusting for linear transcript counts (both linear and circular forms significant).
Molecular mechanism: Predicted miRNA targeting (in-silico) with circRNA-miRNA correlations; downstream pathway enrichment via miRNAs.
Biological pathway or process:

Hippo/YAP (other); other pathway/process (other)

Detected method:
S
Validation methods:

RNA-seq; Bioinformatics Analysis; ROC Analysis

Clinical significance:

Differentially accumulated in PD blood; both circular and linear FAM13B remain significant when modeled together, supporting a robust association.

Description:

circFAM13B is down-regulated in PD blood and remains significantly associated with PD even after jointly modeling its host gene’s linear transcript, suggesting an association beyond simple host-gene expression changes. It is among the study’s five high-confidence blood circRNAs and was further explored via predicted miRNA targets and pathway enrichment.

Confidence score:

0.348

Other information
Title:

Circulating blood circular RNA in Parkinson's Disease; a systematic study.

Journal: medRxiv : the preprint server for health sciences
Published: 2024
PubMed ID: 38343838
Study type:

bioinformatics study

Data availability: PDBP; PPMI
Code availability: -