circRNA basic information
circBase ID: -
Name: hsa_circ_SMARCA5
Synonym: -
Host Gene: SMARCA5
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0003210
MONDO name: intrahepatic cholangiocarcinoma
Disease details: intrahepatic cholangiocarcinoma
Disease DO ID:
4928
Disease MeSH ID:
-
Disease NCIt ID:
C35417
Disease ICD11 ID:
1253728223; 387909164
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissue; adjacent tissue

Cell lines:

TFK-1; HuH-28

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: Inhibits ICC cell proliferation and increases chemotherapy sensitivity to cisplatin and gemcitabine.
Molecular mechanism: Not specified (mechanism not included in this study).
Biological pathway or process:

proliferation (inhibits); chemoresistance (inhibits)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Clinical Sample Validation; Transfection; CCK8; Survival Analysis

Clinical significance:

High circ-SMARCA5 expression is associated with favorable clinicopathological features and longer overall survival; potential prognostic biomarker for ICC.

Description:

circ-SMARCA5 is down-regulated in ICC tumor tissue and higher tumor expression predicts longer overall survival and more favorable clinical features. Functionally, circ-SMARCA5 overexpression suppresses ICC cell proliferation and increases sensitivity to cisplatin and gemcitabine, although the detailed molecular mechanism was not determined in this study.

Confidence score:

0.6524

Other information
Title:

Circular RNA SMARCA5 correlates with favorable clinical tumor features and prognosis, and increases chemotherapy sensitivity in intrahepatic cholangiocarcinoma.

Journal: Journal of clinical laboratory analysis
Published: 2020
PubMed ID: 31880360
Study type:

combined biological and clinical study

Data availability: -
Code availability: -