circRNA basic information
circBase ID: hsa_circ_0007031
Name: hsa_circ_TUBGCP3
Synonym: circ_0007031
Host Gene: TUBGCP3
Genomic location(hg19): chr13:113158345-113181798:-
Genomic location(hg38): chr13:112504031-112527484:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: Colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC specimens; paracancerous normal colorectal tissues; CRC tissues; normal colorectal tissues

Cell lines:

FHC; SW480; HCT116

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MELK
Associated microRNA: miR-485-3p
Biological function: Promotes CRC cell proliferation and tumor formation; inhibits apoptosis; circ_0007031 knockdown represses proliferation, induces G0/G1 arrest and apoptosis, and hinders tumor growth in vivo.
Molecular mechanism: circ_0007031 acts as a sponge for miR-485-3p and upregulates MELK expression in a miR-485-3p-dependent manner.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); apoptosis (inhibits); cell cycle (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model

Clinical significance:

circ_0007031 was suggested as a potential therapeutic target for CRC.

Description:

circ_0007031 is up-regulated in colorectal cancer tissues and CRC cell lines. It promotes CRC malignant progression by sponging miR-485-3p to increase MELK expression, thereby enhancing proliferation and tumor formation while suppressing apoptosis. Its knockdown inhibits tumor growth in vivo, supporting circ_0007031 as a potential therapeutic target for CRC.

Confidence score:

0.742

Other information
Title:

Circ_0007031 Silencing Inhibits Cell Proliferation and Induces Cell Apoptosis via Downregulating MELK at a miR-485-3p-Dependent Way in Colorectal Cancer.

Journal: Biochemical genetics
Published: 2022
PubMed ID: 34322757
Study type:

combined biological and clinical study

Data availability: Please contact the correspondence author for the data request.
Code availability: -