circRNA basic information
circBase ID: hsa_circ_0001821
Name: hsa_circ_PVT1
Synonym: hsa_-circ_0001821
Host Gene: PVT1
Genomic location(hg19): chr8:128902834-128903244:+
Genomic location(hg38): chr8:127890588-127890998:+
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

frozen tumour tissues; paired adjacent tissues; paraffinembedded tissues; tumour tissues

Cell lines:

Huh7; HCCLM3; MHCC97H

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: YBX1, RRM2
Associated microRNA: -
Biological function: CircPVT1 functions as an oncogene in HCC, promoting cell proliferation, tumour growth, migration, invasion, and pulmonary metastasis, while inhibiting apoptosis.
Molecular mechanism: Super-enhancer-driven circPVT1 physically interacts with YBX1, recruits YBX1 into the nucleus, enhances YBX1 occupancy on the RRM2 promoter, and activates RRM2 transcription to promote HCC malignancy.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); metastasis (promotes); other pathway/process (promotes)

Detected method:
Q
H
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; RT-qPCR; FISH / smFISH; ISH (In Situ Hybridization); Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; ChIP / ChIP-seq; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); IF (Immunofluorescence); RNA-seq; Western Blot; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

CircPVT1 overexpression is associated with poor prognosis in HCC and is an independent prognostic factor; lower co-expression of circPVT1 and RRM2 indicates better prognosis.

Description:

circPVT1 is a super-enhancer-driven, PVT1-derived circRNA upregulated in HCC. It promotes HCC proliferation, invasion, tumour growth, and metastasis by binding YBX1 and recruiting it to the nucleus, thereby activating RRM2 transcription. High circPVT1 expression predicts worse OS and DFS and may represent a therapeutic target through inhibition of upstream super-enhancer signaling or downstream RRM2.

Confidence score:

0.9026

Other information
Title:

Super-enhancer-associated circPVT1 promotes malignancy of hepatocellular carcinoma via YBX1-mediated RRM2 activation.

Journal: Cancer letters
Published: 2024
PubMed ID: 39694225
Study type:

combined biological and clinical study

Data availability: GSE112221; GSM3061139; GSM3061124; GSM3061119; GSM3061141; GSM3061126; GSM3061121; TCGA; Supplemental Table S5; Supplemental Table S6; https://doi.org/10.1016/j.canlet.2024.217395
Code availability: -