circRNA basic information
circBase ID: hsa_circ_0005962
Name: hsa_circ_YWHAZ
Synonym: circ_0005962
Host Gene: YWHAZ
Genomic location(hg19): chr8:101936182-101937267:-
Genomic location(hg38): chr8:100923954-100925039:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma / LUAD
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

LUAD tissue samples; adjacent non-tumor samples; xenograft tumor tissue samples

Cell lines:

BEAS-2B; A549; HCC827; H1975; PC9

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CYP24A1
Associated microRNA: miR-3611
Biological function: circ_0005962 promotes LUAD cell proliferation, cell cycle progression, colony formation, sphere formation and tumor growth, and suppresses apoptosis; circ_0005962 knockdown inhibits LUAD cell growth and stemness in vitro and in vivo.
Molecular mechanism: circ_0005962 acts as a ceRNA by sponging miR-3611, thereby modulating CYP24A1 expression in LUAD cells.
Biological pathway or process:

ceRNA regulation (other); proliferation (promotes); cell cycle (promotes); apoptosis (inhibits); stemness (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; CCK8; EdU Staining; Colony Formation Assay; Cell Cycle Assay; Western Blot; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; In Vivo Animal Model; IHC (Immunohistochemistry); Bioinformatics Analysis

Clinical significance:

circ_0005962 expression was associated with TNM grade, lymph node metastasis, and tumor size in LUAD patients.

Description:

circ_0005962 is up-regulated in LUAD tissues and cell lines and is associated with advanced clinicopathologic features. Functionally, it promotes LUAD cell proliferation, cell cycle progression, stem-like sphere formation and xenograft tumor growth. Mechanistically, circ_0005962 functions as a ceRNA that sponges miR-3611 to increase CYP24A1 expression.

Confidence score:

0.8324

Other information
Title:

Circular RNA Circ_0005962 Contributes to Lung Adenocarcinoma Cell Proliferation and Stem Cell Formation Through Sponging of miR-3611 and Modulating CYP24A1 Expression.

Journal: Biochemical genetics
Published: 2023
PubMed ID: 36542209
Study type:

combined biological and clinical study

Data availability: available from the corresponding author on reasonable request; supplementary material available at https:// doi. org/ 10. 1007/ s10528-022-10312-6
Code availability: -