circRNA basic information
circBase ID: hsa_circ_0009582
Name: hsa_circ_RERE
Synonym: circRERE
Host Gene: RERE
Genomic location(hg19): chr1:8555122-8684439:-
Genomic location(hg38): chr1:8495062-8624380:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent normal liver tissues

Cell lines:

HepG2; Hep3B; SNU-449; Huh7; L02

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: GBX2, ZC3H13, AGO2
Associated microRNA: miR-1299
Biological function: circRERE promotes HCC cell viability, growth and invasion, and inhibits apoptosis.
Molecular mechanism: circRERE acts through miR-1299 to promote GBX2 expression and also regulates GBX2 m6A modification through ZC3H13.
Biological pathway or process:

proliferation (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (promotes); m6A modification (other)

Detected method:
Q
Validation methods:

RT-qPCR; Bioinformatics Analysis; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Annexin V/PI Flow Cytometry; Transwell Assay; MeRIP / MeRIP-seq; Western Blot

Clinical significance:

The findings suggest circRERE as a potential new target for the diagnosis and treatment of HCC.

Description:

circRERE is upregulated in HCC cells and functions as an oncogenic circRNA. It promotes HCC cell viability, growth and invasion while suppressing apoptosis by enhancing GBX2 expression through miR-1299 and by modulating GBX2 m6A modification through ZC3H13.

Confidence score:

0.6562

Other information
Title:

circRERE regulates the expression of GBX2 through miR-1299 and ZC3H13/N6-methyladenosine (m6A) to promote growth and invasion of hepatocellular carcinoma cells.

Journal: Journal of biosciences
Published: 2022
PubMed ID: 36222159
Study type:

combined biological and clinical study

Data availability: -
Code availability: -