circRNA basic information
circBase ID: -
Name: rno_circ_ZNF609
Synonym: circ-ZNF609
Host Gene: ZNF609
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0002492
MONDO name: acute kidney injury
Disease details: acute kidney injury / AKI
Disease DO ID:
3021
Disease MeSH ID:
D058186
Disease NCIt ID:
C26808
Disease ICD11 ID:
476391827
Disease OMIM ID:
-
Species: Rat
Species details: Rattus norvegicus
Tissue specimen:

kidney tissues; urinary samples; renal tubular epithelial cells

Cell lines:

HK-2; 293T

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: AKT3 mRNA, AKT3, mTOR, ZNF609-250aa
Associated microRNA: -
Biological function: circ-ZNF609 promotes renal tubular epithelial cell apoptosis and acute kidney injury, impairs autophagic flux, suppresses proliferation, and its silencing is renoprotective in ischemic AKI.
Molecular mechanism: circ-ZNF609 encodes a 250-amino-acid protein, ZNF609-250aa, through an IRES-dependent mechanism; ZNF609-250aa activates AKT3/mTOR signaling, impairs autophagic flux, and promotes apoptosis in ischemic AKI.
Biological pathway or process:

PI3K/AKT/mTOR (promotes); autophagy (inhibits); apoptosis (promotes); proliferation (inhibits); other pathway/process (promotes)

Detected method:
Q
H
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RNA-seq; Transfection; MTS; Annexin V/PI Flow Cytometry; TUNEL; In Vivo Animal Model; H&E Staining; Western Blot; Luciferase Reporter Assay; ROC Analysis; Bioinformatics Analysis; Droplet digital PCR

Clinical significance:

Urinary circ-ZNF609 is a moderate predictor for AKI in patients with acute decompensated heart failure or undergoing cardiac surgery under cardiopulmonary bypass, with an AUC of 0.795.

Description:

circ-ZNF609 is up-regulated in ischemic AKI kidney tissues and in urinary samples from AKI patients. It encodes the 250-aa protein ZNF609-250aa, which activates AKT3/mTOR signaling, impairs autophagic flux, promotes renal tubular epithelial cell apoptosis, suppresses proliferation, and contributes to AKI; urinary circ-ZNF609 also shows moderate diagnostic potential for AKI.

Confidence score:

0.8441

Other information
Title:

A protein encoded by circular ZNF609 RNA induces acute kidney injury by activating the AKT/mTOR-autophagy pathway.

Journal: Molecular therapy : the journal of the American Society of Gene Therapy
Published: 2023
PubMed ID: 36110046
Study type:

combined biological and clinical study

Data availability: All relevant data of this study are available within the article or from the corresponding author on reasonable request; Supplemental information can be found online at https://doi.org/10. 1016/j.ymthe.2022.09.007.
Code availability: -