circRNA basic information
circBase ID: hsa_circ_0027446
Name: hsa_circ_HMGA2
Synonym: Circ_0027446
Host Gene: HMGA2
Genomic location(hg19): chr12:66221780-66232349:+
Genomic location(hg38): chr12:65828000-65838569:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005075
MONDO name: thyroid gland papillary carcinoma
Disease details: papillary thyroid carcinoma / PTC
Disease DO ID:
3969
Disease MeSH ID:
-
Disease NCIt ID:
C4035
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PTC tissues; paracancerous non-cancerous tissues; normal thyroid tissues; primary tumor tissues

Cell lines:

FTC-133; 8505 C; IHH-4; TPC-1; Nthy-ori3-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CLDN1, C-myc, MMP2
Associated microRNA: miR-129-5p
Biological function: Promotes PTC cell proliferation, viability, migration, invasion and tumorigenesis; inhibits apoptosis; high expression is associated with poor prognosis and diagnostic value.
Molecular mechanism: circ_0027446 acts as a miR-129-5p sponge and upregulates CLDN1 expression through the miR-129-5p/CLDN1 pathway.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); metastasis (promotes)

Detected method:
Q
M
Validation methods:

RT-qPCR; RNase R Treatment; Clinical Sample Validation; Bioinformatics Analysis; ROC Analysis; Survival Analysis; Transfection; CCK8; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Wound Healing Assay; Western Blot; Luciferase Reporter Assay; In Vivo Animal Model; IHC (Immunohistochemistry)

Clinical significance:

High circ_0027446 expression was closely associated with poor prognosis of PTC patients and showed diagnostic value for distinguishing PTC from normal control.

Description:

circ_0027446 is upregulated in papillary thyroid cancer tissues and cells and functions as an oncogenic circRNA. It promotes PTC proliferation, migration, invasion and xenograft tumor growth while suppressing apoptosis, mainly by sponging miR-129-5p to increase CLDN1 expression. High circ_0027446 expression is associated with poor patient survival and may have diagnostic and therapeutic relevance.

Confidence score:

0.7987

Other information
Title:

Circ_0027446 induces CLDN1 expression to promote papillary thyroid cancer cell malignancy by binding to miR-129-5p.

Journal: Pathology, research and practice
Published: 2022
PubMed ID: 36058014
Study type:

combined biological and clinical study

Data availability: GSE173299; GEPIA dataset; UALCAN dataset; Supplementary data associated with this article can be found in the online version at doi:10.1016/j.prp.2022.154095
Code availability: -